Morphobank media number
M686922
Taxonomic name
Oxidus gracilis (Koch, C. L., 1847)
Specimen
Oxidus gracilis (Koch, C. L., 1847) (ZFMK/MYR:08923)
Specimen notes
Botanical Garden, Unicersity of Bonn (Bonn, Germany). April 2018
View
Virtual crossection
Media loaded by
Leif Moritz
Media notes
[System]
Scanner=SkyScan1272
Instrument S/N=13D09036
Software Version=1.1.7
Home Directory=C:SkyScan1272
Source Type=HAMAMATSU_L11871_20
Camera Type=XIMEA xiRAY11
Camera Pixel Size (um)=9.0
Camera X/Y Ratio=0.9783
[User]
User Name=microct
Computer Name=SCANNER1272
[Acquisition]
Data Directory=E:ResultsLeifLM19_Oxidus
Filename Prefix=LM19_Oxidus_
Filename Index Length=8
Number Of Files= 1877
Number Of Rows= 2688
Number Of Columns= 4032
Partial Width=OFF
Image crop origin X=0
Image crop origin Y=0
Camera binning=1x1
Image Rotation=0.09800
Optical Axis (line)= 1440
Camera to Source (mm)=270.50087
Object to Source (mm)=36.78292
Source Voltage (kV)= 50
Source Current (uA)= 200
Image Pixel Size (um)=1.200438
Scaled Image Pixel Size (um)=1.200438
Image Format=TIFF
Depth (bits)=16
Reference Intensity=57000
Exposure (ms)=500
Rotation Step (deg)=0.100
Use 360 Rotation=NO
Scanning position=18.777 mm
Frame Averaging=ON (7)
Random Movement=ON (15)
Flat Field Correction=ON
FF updating interval=313
Geometrical Correction=ON
Filter=No Filter
Gantry direction=CC
Rotation Direction=CC
Type of Detector Motion=STEP AND SHOOT
Scanning Trajectory=ROUND
Number Of Horizontal Offset Positions=1
Study Date and Time=28 Mar 2018 20h:46m:39s
Scan duration=3h:51m:38s
Maximum vertical TS=9.0
Maximum horizontal TS=3.0
TS modified at=March29,10:39:40 --- 1877 of 1877 projections
TS modified according to=E:ResultsLeifLM19_OxidusLM19_Oxidus__TS.csv
TS modified at level=0
[Reconstruction]
Reconstruction Program=NRecon
Program Version=Version: 1.7.1.0
Program Home Directory=C:SkyScan1272
Reconstruction engine=NReconServer
Engine version=Version: 1.7.1
Reconstruction from batch=No
Postalignment=-1.50
Reconstruction servers= SCANNER1272
Reconstruction mode=Standard
Dataset Origin=SkyScan1272
Dataset Prefix=LM19_Oxidus_
Dataset Directory=E:ResultsLeifLM19_Oxidus
Output Directory=E:ResultsLeifLM19_OxidusLM19_Oxidus_Rec
Time and Date=Mar 29, 2018 22:33:24
First Section=677
Last Section=2256
Reconstruction duration per slice (seconds)=8.302531
Total reconstruction time (1580 slices) in seconds=13118.000000
Section to Section Step=1
Sections Count=1580
Result File Type=TIF
Result File Header Length (bytes)=12
Result Image Width (pixels)=3180
Result Image Height (pixels)=3236
Pixel Size (um)=1.20044
Reconstruction Angular Range (deg)=187.70
Use 180+=OFF
Angular Step (deg)=0.1000
Smoothing=0
Ring Artifact Correction=4
Draw Scales=OFF
Object Bigger than FOV=OFF
Reconstruction from ROI=ON
ROI Top (pixels)=3609
ROI Bottom (pixels)=372
ROI Left (pixels)=336
ROI Right (pixels)=3517
ROI reference length=4032
Filter cutoff relative to Nyquist frequency=100
Filter type=0
Filter type description=Hamming (Alpha=0.54)
Undersampling factor=1
Threshold for defect pixel mask (%)=0
Beam Hardening Correction (%)=0
CS Static Rotation (deg)=0.00
Minimum for CS to Image Conversion=-0.158470
Maximum for CS to Image Conversion=0.550609
HU Calibration=OFF
BMP LUT=0
Cone-beam Angle Horiz.(deg)=7.528548
Cone-beam Angle Vert.(deg)=5.023046
[File name convention]
Filename Index Length=8
Filename Prefix=LM19_Oxidus__rec
Media loaded on
March 17 2020 at 5:03:17
This media record has been viewed 369 times 