Project 2282: J. Robalino,B. Wilkins,H. D. Bracken-Grissom,T. Y. Chan,M. A. O'Leary. 2016. The Origin of Large-Bodied Shrimp that Dominate Modern Global Aquaculture. PLOS ONE:1-24.
Specimen: Penaeus monodon (USNM:216152)
View: body, lateral

Abstract

Several shrimp species from the clade Penaeidae are farmed industrially for human consumption, and this farming has turned shrimp into the largest seafood commodity in the world. The species that are in demand for farming are an anomaly within their clade because they grow to much larger sizes than other members of Penaeidae. Here we trace the evolutionary history of the anomalous farmed shrimp using combined data phylogenetic analysis of living and fossil species. We show that exquisitely preserved fossils of †Antrimpos speciosus from the Late Jurassic Solnhofen limestone belong to the same clade as the species that dominate modern farming, dating the origin of this clade to at least 145 mya. This finding contradicts a much younger Late Cretaceous age (ca. 95 mya) previously estimated for this clade using molecular clocks. The species in the farmed shrimp clade defy a widespread tendency, by reaching relatively large body sizes despite their warm water lifestyles. Small body sizes have been shown to be physiologically favored in warm aquatic environments because satisfying oxygen demands is difficult for large organisms breathing in warm water. Our analysis shows that large-bodied, farmed shrimp have more gills than their smaller-bodied shallow-water relatives, suggesting that extra gills may have been key to the clade’s ability to meet oxygen demands at a large size. Our combined data phylogenetic tree also suggests that, during penaeid evolution, the adoption of mangrove forests as habitats for young shrimp occurred multiple times independently.


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Article DOI: DOI:10.1371/journal.pone.0158840

Project DOI: 10.7934/P2282, http://dx.doi.org/10.7934/P2282
This project containsMatrices
  • 886 Media
  • 1 Matrix
  • 35 Documents
  • 63 Taxa
  • 213 Specimens
  • 339 Characters
Total size of project's media files: 2048 MB

Download Project SDD File
Total scored cells: 21284
Total media associated with cells: 2969
Total labels associated with cell media: 2293
Characters
Total characters: 339
Total characters with associated media: 69
Total characters with media with labels: 39
Total character states: 778
Total character states with associated media: 273
Total character states with media with labels:200
Total unordered/ordered characters:339/0
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MorphoBank Project 2282

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    Javier Robalino
    Project Administrator
    Last logged in 08/26/16
    6312603393350908
    (0, 0, 8)
    012110767
    Heather Bracken-Grissom
    Observer
    Last logged in Never
    000000000
    (0, 0, 0)
    0000
    Tin Yam Chan
    Observer
    Last logged in 06/30/16
    000000000
    (0, 0, 0)
    0000
    Seth Kaufman
    Full membership
    Last logged in 06/26/16
    021286041800349021276
    (16293, 2740, 2243)
    17724284821860


    Taxonomic Overview for Matrix 'M23617' (63 Taxa)

    taxon unscored
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    scored
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    [1] † Acanthochirana smithwoodwardi
    Last Modified in 09/25/15
    066027213019none
    [2] † Aeger tipularius
    Last Modified in 12/10/15
    174026047351none
    [3] Acetes americanus carolinae
    Last Modified in 12/09/15
    22283179200none
    [4] † Antrimpos speciosus
    Last Modified in 09/30/15
    01130220610168none
    [5] Aristaeomorpha foliacea
    Last Modified in 09/22/15
    129323542171173none
    [6] Aristaeopsis edwardsiana
    Last Modified in 09/22/15
    129821040173168none
    [7] Aristeus virilis
    Last Modified in 09/22/15
    130429035151110none
    [8] Artemesia longinaris
    Last Modified in 09/22/15
    029730428887none
    [9] Atypopenaeus formosus
    Last Modified in 12/09/15
    42793193800none
    [10] Atypopenaeus stenodactylus
    Last Modified in 09/22/15
    02831213631none
    [11] Bentheogennema intermedia
    Last Modified in 09/22/15
    1236164386653none
    [12] Benthesicymus investigatoris
    Last Modified in 09/22/15
    2270534348261none
    [13] Benthonectes filipes
    Last Modified in 09/22/15
    1279326338865none
    [14] Cryptopenaeus clevai
    Last Modified in 09/22/15
    0218097247572none
    [15] Deosergestes corniculum
    Last Modified in 09/22/15
    226534694235none
    [16] † Drobna deformis
    Last Modified in 10/05/15
    01030229710040none
    [17] Euphausia superba
    Last Modified in 09/22/15
    32041412830none
    [18] Farfantepenaeus aztecus
    Last Modified in 09/22/15
    131051288885none
    [19] Fenneropenaeus merguiensis
    Last Modified in 09/22/15
    130147308285none
    [20] Funchalia villosa
    Last Modified in 09/22/15
    128821634143none
    [21] Gennadas valens
    Last Modified in 09/22/15
    32761223800none
    [22] Gordonella paravillosa
    Last Modified in 09/22/15
    228922028550none
    [23] Hadropenaeus lucasii
    Last Modified in 09/22/15
    1292620267775none
    [24] Haliporoides sibogae
    Last Modified in 09/22/15
    1300217227859none
    [25] Haliporus taprobanensis
    Last Modified in 09/22/15
    1305117176161none
    [26] Hemipenaeus carpenteri
    Last Modified in 09/22/15
    2284823305634none
    [27] Hepomadus tener
    Last Modified in 09/22/15
    22901212620none
    [28] Heteropenaeus longimanus
    Last Modified in 09/22/15
    02701402920none
    [29] Hymenopenaeus debilis
    Last Modified in 09/22/15
    12821302600none
    [30] Hymenopenaeus equalis
    Last Modified in 09/22/15
    02901212890none
    [31] † Ifasya madagascariensis
    Last Modified in 09/22/15
    050028543822none
    [32] Litopenaeus setiferus
    Last Modified in 09/22/15
    13073130131none
    [33] Macropetasma africana
    Last Modified in 09/22/15
    12721214810none
    [34] Marsupenaeus japonicus
    Last Modified in 09/22/15
    0307323021none
    [35] Megokris pescadoreensis
    Last Modified in 09/22/15
    12762243890none
    [36] Melicertus latisulcatus
    Last Modified in 09/22/15
    1290319308896none
    [37] Mesopenaeus brucei
    Last Modified in 09/22/15
    2276132295343none
    [38] Metalpheus rostratipes
    Last Modified in 06/27/16
    72301336932none
    [39] Metapenaeopsis palmensis
    Last Modified in 09/22/15
    1283420357783none
    [40] Metapenaeus ensis
    Last Modified in 09/22/15
    1289317329171none
    [41] † Palaeobenthesicymus libanensis
    Last Modified in 09/22/15
    19302396184129none
    [42] † Paleomattea deliciosa
    Last Modified in 09/22/15
    1860239133922none
    [43] Parahepomadus vaubani
    Last Modified in 09/22/15
    228512132160none
    [44] Parapenaeopsis cornuta
    Last Modified in 09/22/15
    1283316397949none
    [45] Parapenaeus sextuberculatus
    Last Modified in 09/22/15
    12983436100none
    [46] Pelagopenaeus balboae
    Last Modified in 09/22/15
    02891163420none
    [47] Penaeopsis eduardoi
    Last Modified in 09/22/15
    129915348076none
    [48] Penaeus monodon
    Last Modified in 09/22/15
    13041232324none
    [49] Pleoticus robustus
    Last Modified in 09/22/15
    03071726122none
    [50] Plesionika grandis
    Last Modified in 09/22/15
    22542216200none
    [51] Plesiopenaeus armatus
    Last Modified in 09/22/15
    2297151921135119none
    [52] Pseudaristeus kathleenae
    Last Modified in 09/22/15
    32761303120none
    [53] Rimapenaeus pacificus
    Last Modified in 09/22/15
    228351737100none
    [54] Sergia robusta
    Last Modified in 09/22/15
    32531176632none
    [55] Sicyonella sp
    Last Modified in 09/22/15
    132421206400none
    [56] Sicyonia brevirostris
    Last Modified in 09/22/15
    12851154292none
    [57] Sicyonia laevigata
    Last Modified in 09/22/15
    2280155200none
    [58] Sicyonia lancifer
    Last Modified in 09/22/15
    128354518478none
    [59] Solenocera melantho
    Last Modified in 09/22/15
    131052278672none
    [60] Systellaspis pellucida
    Last Modified in 09/22/15
    32671224800none
    [61] Trachypenaeopsis mobilispinis
    Last Modified in 09/22/15
    2284217371914none
    [62] Trachysalambria curvirostris
    Last Modified in 09/22/15
    12822193700none
    [63] Xiphopenaeus kroyeri
    Last Modified in 09/22/15
    12862163620none


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    Matrix views1184Matrix landing page (1051 views); Morphological Characters: Penaeoidea (133 views);
    Documents list829
    Views for media list2536
    Taxon list4366
    Specimen list30012
    Bibliography4279




    Project downloads

    type number of downloads Individual items downloaded (where applicable)
    Total downloads from project204
    Project downloads161
    Matrix downloads33Morphological Characters: Penaeoidea (33 downloads);
    Document downloads9Combined data matrix (4 downloads); infile (2 downloads); USNM Perez-Farfante and Kensley 1997 (1 download); Shrimp combined data ALL CORR (2 downloads);
    Media downloads1M400384 (1 download);