Project 2282: J. Robalino, W. O. Wong, B. Wilkins, H. D. Bracken-Grissom, T. Chan, M. A. O’Leary. 2016. The Origin of Large-Bodied Shrimp that Dominate Modern Global Aquaculture. PLOS ONE. 11 (7):e0158840.
Abstract
Several shrimp species from the clade Penaeidae are farmed industrially for human consumption, and this farming has turned shrimp into the largest seafood commodity in the world. The species that are in demand for farming are an anomaly within their clade because they grow to much larger sizes than other members of Penaeidae. Here we trace the evolutionary history of the anomalous farmed shrimp using combined data phylogenetic analysis of living and fossil species. We show that exquisitely preserved fossils of †Antrimpos speciosus from the Late Jurassic Solnhofen limestone belong to the same clade as the species that dominate modern farming, dating the origin of this clade to at least 145 mya. This finding contradicts a much younger Late Cretaceous age (ca. 95 mya) previously estimated for this clade using molecular clocks. The species in the farmed shrimp clade defy a widespread tendency, by reaching relatively large body sizes despite their warm water lifestyles. Small body sizes have been shown to be physiologically favored in warm aquatic environments because satisfying oxygen demands is difficult for large organisms breathing in warm water. Our analysis shows that large-bodied, farmed shrimp have more gills than their smaller-bodied shallow-water relatives, suggesting that extra gills may have been key to the clade’s ability to meet oxygen demands at a large size. Our combined data phylogenetic tree also suggests that, during penaeid evolution, the adoption of mangrove forests as habitats for young shrimp occurred multiple times independently.Read the article »
Article DOI: 10.1371/journal.pone.0158840
Project DOI: 10.7934/P2282, http://dx.doi.org/10.7934/P2282
This project contains | Matrices |
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Download Project SDD File | Total scored cells: 21284 Total media associated with cells: 2969 Total labels associated with cell media: 2293 |
Characters | |
Total characters: 339 Total characters with associated media: 69 Total characters with media with labels: 39 Total character states: 778 Total character states with associated media: 273 Total character states with media with labels:190 Total unordered/ordered characters:339/0 |
Currently Viewing:
MorphoBank Project 2282
MorphoBank Project 2282
- Creation Date:
22 September 2015 - Publication Date:
28 June 2016 - Media downloads: 3
- Matrix downloads: 50
This research
supported by
Authors' Institutions
- Florida International University
- National Taiwan Ocean University
- Stony Brook University
Members
member name | taxa | specimens | media | media notes | chars | character
| cell scorings (scored, NPA, "-") | cell
| rules | ||||||||||
Javier Robalino Project Administrator | 63 | 1 | 26 | 0 | 339 | 335 | 0 | 90 | 8 (0, 0, 8) | 0 | 121 | 107 | 67 | ||||||
Heather Bracken-Grissom Observer | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 (0, 0, 0) | 0 | 0 | 0 | 0 | ||||||
Tin Yam Chan Observer | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 (0, 0, 0) | 0 | 0 | 0 | 0 | ||||||
Seth Kaufman | 0 | 212 | 860 | 418 | 0 | 0 | 349 | 0 | 21276 (16293, 2740, 2243) | 17724 | 2848 | 2186 | 0 |
Taxonomic Overview for Matrix 'M23617' (63 Taxa)
taxon | unscored cells |
scored cells |
no cell support |
NPA cells |
"-" cells | cell images | labels on cell images |
member access |
[1] † Acanthochirana smithwoodwardi Taxon name last Modified on 09/25/15 | 0 | 66 | 0 | 272 | 1 | 30 | 19 | 4 |
[2] † Aeger tipularius Taxon name last Modified on 12/10/15 | 1 | 74 | 0 | 260 | 4 | 73 | 51 | 4 |
[3] Acetes americanus carolinae Taxon name last Modified on 12/09/15 | 2 | 228 | 3 | 17 | 92 | 0 | 0 | 4 |
[4] † Antrimpos speciosus Taxon name last Modified on 09/30/15 | 0 | 113 | 0 | 220 | 6 | 101 | 68 | 4 |
[5] Aristaeomorpha foliacea Taxon name last Modified on 09/22/15 | 1 | 293 | 23 | 5 | 42 | 171 | 173 | 4 |
[6] Aristaeopsis edwardsiana Taxon name last Modified on 09/22/15 | 1 | 298 | 21 | 0 | 40 | 173 | 168 | 4 |
[7] Aristeus virilis Taxon name last Modified on 09/22/15 | 1 | 304 | 29 | 0 | 35 | 151 | 110 | 4 |
[8] Artemesia longinaris Taxon name last Modified on 09/22/15 | 0 | 297 | 3 | 0 | 42 | 88 | 87 | 4 |
[9] Atypopenaeus formosus Taxon name last Modified on 12/09/15 | 4 | 279 | 3 | 19 | 38 | 0 | 0 | 4 |
[10] Atypopenaeus stenodactylus Taxon name last Modified on 09/22/15 | 0 | 283 | 1 | 21 | 36 | 3 | 1 | 4 |
[11] Bentheogennema intermedia Taxon name last Modified on 09/22/15 | 1 | 236 | 1 | 64 | 38 | 66 | 53 | 4 |
[12] Benthesicymus investigatoris Taxon name last Modified on 09/22/15 | 2 | 270 | 5 | 34 | 34 | 82 | 61 | 4 |
[13] Benthonectes filipes Taxon name last Modified on 09/22/15 | 1 | 279 | 3 | 26 | 33 | 88 | 65 | 4 |
[14] Cryptopenaeus clevai Taxon name last Modified on 09/22/15 | 0 | 218 | 0 | 97 | 24 | 75 | 72 | 4 |
[15] Deosergestes corniculum Taxon name last Modified on 09/22/15 | 2 | 265 | 3 | 4 | 69 | 42 | 35 | 4 |
[16] † Drobna deformis Taxon name last Modified on 10/05/15 | 0 | 103 | 0 | 229 | 7 | 100 | 40 | 4 |
[17] Euphausia superba Taxon name last Modified on 09/22/15 | 3 | 204 | 1 | 4 | 128 | 3 | 0 | 4 |
[18] Farfantepenaeus aztecus Taxon name last Modified on 09/22/15 | 1 | 310 | 5 | 1 | 28 | 88 | 85 | 4 |
[19] Fenneropenaeus merguiensis Taxon name last Modified on 09/22/15 | 1 | 301 | 4 | 7 | 30 | 82 | 85 | 4 |
[20] Funchalia villosa Taxon name last Modified on 09/22/15 | 1 | 288 | 2 | 16 | 34 | 14 | 3 | 4 |
[21] Gennadas valens Taxon name last Modified on 09/22/15 | 3 | 276 | 1 | 22 | 38 | 0 | 0 | 4 |
[22] Gordonella paravillosa Taxon name last Modified on 09/22/15 | 2 | 289 | 2 | 20 | 28 | 55 | 0 | 4 |
[23] Hadropenaeus lucasii Taxon name last Modified on 09/22/15 | 1 | 292 | 6 | 20 | 26 | 77 | 75 | 4 |
[24] Haliporoides sibogae Taxon name last Modified on 09/22/15 | 1 | 300 | 2 | 17 | 22 | 78 | 59 | 4 |
[25] Haliporus taprobanensis Taxon name last Modified on 09/22/15 | 1 | 305 | 1 | 17 | 17 | 61 | 61 | 4 |
[26] Hemipenaeus carpenteri Taxon name last Modified on 09/22/15 | 2 | 284 | 8 | 23 | 30 | 56 | 34 | 4 |
[27] Hepomadus tener Taxon name last Modified on 09/22/15 | 2 | 290 | 1 | 21 | 26 | 2 | 0 | 4 |
[28] Heteropenaeus longimanus Taxon name last Modified on 09/22/15 | 0 | 270 | 1 | 40 | 29 | 2 | 0 | 4 |
[29] Hymenopenaeus debilis Taxon name last Modified on 09/22/15 | 1 | 282 | 1 | 30 | 26 | 0 | 0 | 4 |
[30] Hymenopenaeus equalis Taxon name last Modified on 09/22/15 | 0 | 290 | 1 | 21 | 28 | 9 | 0 | 4 |
[31] † Ifasya madagascariensis Taxon name last Modified on 09/22/15 | 0 | 50 | 0 | 285 | 4 | 38 | 22 | 4 |
[32] Litopenaeus setiferus Taxon name last Modified on 09/22/15 | 1 | 307 | 3 | 1 | 30 | 13 | 1 | 4 |
[33] Macropetasma africana Taxon name last Modified on 09/22/15 | 1 | 272 | 1 | 21 | 48 | 1 | 0 | 4 |
[34] Marsupenaeus japonicus Taxon name last Modified on 09/22/15 | 0 | 307 | 3 | 2 | 30 | 2 | 1 | 4 |
[35] Megokris pescadoreensis Taxon name last Modified on 09/22/15 | 1 | 276 | 2 | 24 | 38 | 9 | 0 | 4 |
[36] Melicertus latisulcatus Taxon name last Modified on 09/22/15 | 1 | 290 | 3 | 19 | 30 | 88 | 96 | 4 |
[37] Mesopenaeus brucei Taxon name last Modified on 09/22/15 | 2 | 276 | 1 | 32 | 29 | 53 | 43 | 4 |
[38] Metalpheus rostratipes Taxon name last Modified on 06/27/16 | 7 | 230 | 1 | 33 | 69 | 3 | 2 | 4 |
[39] Metapenaeopsis palmensis Taxon name last Modified on 09/22/15 | 1 | 283 | 4 | 20 | 35 | 77 | 83 | 4 |
[40] Metapenaeus ensis Taxon name last Modified on 09/22/15 | 1 | 289 | 3 | 17 | 32 | 91 | 71 | 4 |
[41] † Palaeobenthesicymus libanensis Taxon name last Modified on 09/22/15 | 1 | 93 | 0 | 239 | 6 | 184 | 129 | 4 |
[42] † Paleomattea deliciosa Taxon name last Modified on 09/22/15 | 1 | 86 | 0 | 239 | 13 | 39 | 22 | 4 |
[43] Parahepomadus vaubani Taxon name last Modified on 09/22/15 | 2 | 285 | 1 | 21 | 32 | 16 | 0 | 4 |
[44] Parapenaeopsis cornuta Taxon name last Modified on 09/22/15 | 1 | 283 | 3 | 16 | 39 | 79 | 49 | 4 |
[45] Parapenaeus sextuberculatus Taxon name last Modified on 09/22/15 | 1 | 298 | 3 | 4 | 36 | 10 | 0 | 4 |
[46] Pelagopenaeus balboae Taxon name last Modified on 09/22/15 | 0 | 289 | 1 | 16 | 34 | 2 | 0 | 4 |
[47] Penaeopsis eduardoi Taxon name last Modified on 09/22/15 | 1 | 299 | 1 | 5 | 34 | 80 | 76 | 4 |
[48] Penaeus monodon Taxon name last Modified on 09/22/15 | 1 | 304 | 1 | 2 | 32 | 32 | 4 | 4 |
[49] Pleoticus robustus Taxon name last Modified on 09/22/15 | 0 | 307 | 1 | 7 | 26 | 12 | 2 | 4 |
[50] Plesionika grandis Taxon name last Modified on 09/22/15 | 2 | 254 | 2 | 21 | 62 | 0 | 0 | 4 |
[51] Plesiopenaeus armatus Taxon name last Modified on 09/22/15 | 2 | 297 | 15 | 19 | 21 | 135 | 119 | 4 |
[52] Pseudaristeus kathleenae Taxon name last Modified on 09/22/15 | 3 | 276 | 1 | 30 | 31 | 2 | 0 | 4 |
[53] Rimapenaeus pacificus Taxon name last Modified on 09/22/15 | 2 | 283 | 5 | 17 | 37 | 10 | 0 | 4 |
[54] Sergia robusta Taxon name last Modified on 09/22/15 | 3 | 253 | 1 | 17 | 66 | 3 | 2 | 4 |
[55] Sicyonella sp Taxon name last Modified on 09/22/15 | 13 | 242 | 1 | 20 | 64 | 0 | 0 | 4 |
[56] Sicyonia brevirostris Taxon name last Modified on 09/22/15 | 1 | 285 | 1 | 1 | 54 | 29 | 2 | 4 |
[57] Sicyonia laevigata Taxon name last Modified on 09/22/15 | 2 | 280 | 1 | 5 | 52 | 0 | 0 | 4 |
[58] Sicyonia lancifer Taxon name last Modified on 09/22/15 | 1 | 283 | 5 | 4 | 51 | 84 | 78 | 4 |
[59] Solenocera melantho Taxon name last Modified on 09/22/15 | 1 | 310 | 5 | 2 | 27 | 86 | 72 | 4 |
[60] Systellaspis pellucida Taxon name last Modified on 09/22/15 | 3 | 267 | 1 | 22 | 48 | 0 | 0 | 4 |
[61] Trachypenaeopsis mobilispinis Taxon name last Modified on 09/22/15 | 2 | 284 | 2 | 17 | 37 | 19 | 14 | 4 |
[62] Trachysalambria curvirostris Taxon name last Modified on 09/22/15 | 1 | 282 | 2 | 19 | 37 | 0 | 0 | 4 |
[63] Xiphopenaeus kroyeri Taxon name last Modified on 09/22/15 | 1 | 286 | 2 | 16 | 36 | 2 | 0 | 4 |
Project downloads
type | number of downloads | Individual items downloaded (where applicable) |
Total downloads from project | 418 | |
Project downloads | 356 | |
Matrix downloads | 50 | Morphological Characters: Penaeoidea (50 downloads); |
Document downloads | 9 | Combined data matrix (4 downloads); infile (2 downloads); USNM Perez-Farfante and Kensley 1997 (1 download); Shrimp combined data ALL CORR (2 downloads); |
Media downloads | 3 | M400384 (2 downloads); M400904 (1 download); |