Project 2349: D. Davesne, C. Gallut, V. Barriel, P. Janvier, G. Lecointre, O. Otero. 2016. The phylogenetic intrarelationships of spiny-rayed fishes (Acanthomorpha, Teleostei, Actinopterygii): fossil taxa increase the congruence of morphology with molecular data. Frontiers in Ecology and Evolution. 4:129.
Specimen: † Pycnosteroides levispinosus (MNHN:MNHN.F.HDJ105)

Abstract

Acanthomorpha (spiny-rayed fishes) is a clade of teleosts that includes more than 15 000 extant species. Their deep phylogenetic intrarelationships, first reconstructed using morphological characters, have been extensively revised with molecular data. Moreover, the deep branches of the acanthomorph tree are still largely unresolved, with strong disagreement between studies. Here, we review the historical propositions for acanthomorph deep intrarelationships and attempt to resolve their earliest branching patterns using a new morphological data matrix compiling and revising characters from previous studies. The taxon sampling we use constitutes a first attempt to test all previous hypotheses (molecular and morphological alike) with morphological data only. Our sampling also includes Late Cretaceous fossil taxa, which yield new character state combinations that are absent in extant taxa. Analysis of the complete morphological data matrix yields a new topology that shows remarkable congruence with the well-supported molecular results. Lampridiformes (oarfishes and allies) are the sister to all other acanthomorphs. Gadiformes (cods and allies) and Zeiformes (dories) form a clade with Percopsiformes (trout-perches) and the enigmatic Polymixia (beardfish) and Stylephorus (tube-eye). Ophidiiformes (cusk-eels and allies) and Batrachoidiformes (toadfishes) are nested within Percomorpha, the clade that includes most of modern acanthomorph diversity. These results provide morphological synapomorphies and independent corroboration of clades previously only recovered from molecular data, thereby suggesting the emergence of a congruent picture of acanthomorph deep intrarelationships. Fossil taxa play a critical role in achieving this congruence, since a very different topology is found when they are excluded from the analysis.


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Article DOI: doi: 10.3389/fevo.2016.00129

Project DOI: 10.7934/P2349, http://dx.doi.org/10.7934/P2349
This project containsMatrices
  • 17 Media
  • 1 Matrix
  • 28 Taxa
  • 17 Specimens
  • 66 Characters
Total size of project's media files: 42 MB

Download Project SDD File
Total scored cells: 1591
Total media associated with cells: 0
Total labels associated with cell media: 0
Characters
Total characters: 66
Total characters with associated media: 0
Total characters with media with labels: 0
Total character states: 150
Total character states with associated media: 0
Total character states with media with labels:0
Total unordered/ordered characters:66/0
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MorphoBank Project 2349


    Members

    member name taxa specimens media chars character
    media
    labels
    cell scorings
    (scored, NPA, "-")
    cell
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    rules
    Donald Davesne
    Project Administrator
    Last logged in 11/01/16
    28171766001591
    (1526, 0, 65)
    000
    Cyril Gallut
    Full membership
    Last logged in 03/14/16
    0000000
    (0, 0, 0)
    000
    Olga Otero
    Full membership
    Last logged in 02/13/16
    0000000
    (0, 0, 0)
    000


    Taxonomic Overview for Matrix 'M24311' (26 Taxa)

    taxon unscored
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    scored
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    "-" cellscell images labels on
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    [1] Synodus
    Last Modified in 10/17/16
    0636303003
    [2] Gymnoscopelus
    Last Modified in 10/17/16
    1626203003
    [3] † Ctenothrissa
    Last Modified in 10/17/16
    9545403003
    [4] † Pycnosteroides
    Last Modified in 10/17/16
    18494800003
    [5] † Aipichthys
    Last Modified in 10/17/16
    11535302003
    [6] † Aipichthyoides
    Last Modified in 10/17/16
    16484802003
    [7] † Omosomopsis
    Last Modified in 10/17/16
    15505001003
    [8] † Sphenocephalus
    Last Modified in 10/17/16
    11565500003
    [9] † Stichocentrus
    Last Modified in 10/17/16
    19484700003
    [10] Velifer
    Last Modified in 10/17/16
    1636302003
    [11] Lampris
    Last Modified in 10/17/16
    0636303003
    [12] Regalecus
    Last Modified in 10/17/16
    45151011003
    [13] Stylephorus
    Last Modified in 10/17/16
    74848011003
    [14] Polymixia
    Last Modified in 10/17/16
    0656501003
    [15] Aphredoderus
    Last Modified in 10/17/16
    0646402003
    [16] Percopsis
    Last Modified in 10/17/16
    0646402003
    [17] Bregmaceros
    Last Modified in 10/17/16
    9555403003
    [18] Merluccius
    Last Modified in 10/17/16
    2616103003
    [19] Halobatrachus
    Last Modified in 10/17/16
    0616105003
    [20] Brotula
    Last Modified in 10/17/16
    1595906003
    [21] Cyttus
    Last Modified in 10/17/16
    2636301003
    [22] Zeus
    Last Modified in 10/17/16
    0656501003
    [23] Hoplostethus
    Last Modified in 10/17/16
    1656500003
    [24] Sargocentron
    Last Modified in 10/17/16
    0666600003
    [25] Dicentrarchus
    Last Modified in 10/17/16
    0666600003
    [26] Lates
    Last Modified in 10/17/16
    2646400003


    Project views

    type number of views Individual items viewed (where applicable)
    Total project views17227
    Project overview1569
    Media views6625Media search (1491 views); M407196 (467 views); M407201 (300 views); M407198 (288 views); M407199 (339 views); M407200 (283 views); M407202 (229 views); M407203 (316 views); M407204 (337 views); M407205 (295 views); M407206 (262 views); M407207 (326 views); M407208 (309 views); M407209 (209 views); M407210 (176 views); M407194 (327 views); M407195 (356 views); M407197 (315 views);
    Taxon list3389
    Specimen list4399
    Matrix views858Matrix landing page (786 views); Morphological character matrix, with extant and fossil taxa (72 views);
    Bibliography386
    Documents list1




    Project downloads

    type number of downloads Individual items downloaded (where applicable)
    Total downloads from project176
    Project downloads169
    Media downloads1M407210 (1 download);
    Matrix downloads6Morphological character matrix, with extant and fossil taxa (6 downloads);