Project 4765: O. R. Regalado Fernandez, F. Sour-Tovar. 2023. The agnostid trilobite assemblage from San José de Gracia, Sonora, México, and the implications of phylogenetics in stratigraphic calibration. Historical Biology. 35 (3):436-456.
Abstract
The outcrop of San José de Gracia yields an agnostid assemblage that has been assigned to the middle Cambrian. Although agnostid trilobites are important biostratigraphic markers, the mosaic evolution of this group makes species-level determination difficult, and thus biostratigraphic correlations become cumbersome. The assemblage is described here using morphogroups of the ‘peronopsid’-like agnostids, and specimen-level phylogenetics is used to assess the statistical significance of assigning different ages to the final topology (stratigraphic fit), including the morphogroups as operational taxonomic units. A proper phylogenetic analysis requires considering modularity and ontogenetic development in agnostids, but the overall topology can respond to different stratigraphic calibrations even if the individual relationships are not resolved. Using the distribution of several stratigraphic fit metrics, namely SCI, GER and MSM*, we find that the biozone Plagiura-Poliella (509–598.4 Mya) is the one that offers the best stratigraphic fit for the outcrop of San José de Gracia, and it is consistent with the current biostratigraphic framework that has been built for the middle Cambrian of Sonora.Read the article »
Article DOI: 10.1080/08912963.2022.2044323
Project DOI: 10.7934/P4765, http://dx.doi.org/10.7934/P4765
This project contains | Matrices |
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Download Project SDD File | Total scored cells: 14458 Total media associated with cells: 0 Total labels associated with cell media: 0 |
Characters | |
Total characters: 129 Total characters with associated media: 0 Total characters with media with labels: 0 Total character states: 311 Total character states with associated media: 0 Total character states with media with labels:0 Total unordered/ordered characters:129/0 |
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MorphoBank Project 4765
MorphoBank Project 4765
- Creation Date:
20 July 2023 - Publication Date:
27 July 2023 - Media downloads: 2
Authors' Institutions
- Universidad Nacional Autonoma de Mexico (UNAM)
- University College London
Members
member name | taxa | specimens | media | chars | character
| cell scorings (scored, NPA, "-") | cell
| rules | ||||||
Shreya Jariwala Project Administrator | 124 | 9 | 8 | 129 | 0 | 0 | 14458 (11820, 0, 2638) | 0 | 0 | 0 | ||||
Brooke Long-Fox Full membership | 0 | 0 | 0 | 0 | 0 | 0 | 0 (0, 0, 0) | 0 | 0 | 0 |
Taxonomic Overview for Matrix 'M29374' (124 Taxa)
taxon | unscored cells |
scored cells |
no cell support |
NPA cells |
"-" cells | cell images | labels on cell images |
member access |
[1] † Tsunyidiscus Taxon name last Modified on 07/21/23 | 8 | 152 | 115 | 0 | 6 | 0 | 0 | 2 |
[2] † Neocobboldia dentata Taxon name last Modified on 07/21/23 | 4 | 99 | 99 | 0 | 26 | 0 | 0 | 2 |
[3] † Abakolia minutus Taxon name last Modified on 07/21/23 | 2 | 104 | 102 | 0 | 25 | 0 | 0 | 2 |
[4] † Abakolia pauca Taxon name last Modified on 07/21/23 | 10 | 97 | 94 | 0 | 25 | 0 | 0 | 2 |
[5] † Acidiscus birdi Taxon name last Modified on 07/21/23 | 12 | 94 | 93 | 0 | 24 | 0 | 0 | 2 |
[6] † Acidiscus theristes Taxon name last Modified on 07/21/23 | 3 | 109 | 105 | 0 | 21 | 0 | 0 | 2 |
[7] † Acimetopus bilobatus Taxon name last Modified on 07/21/23 | 8 | 96 | 95 | 0 | 26 | 0 | 0 | 2 |
[8] † Alaskadiscus spinosus Taxon name last Modified on 07/21/23 | 2 | 110 | 108 | 0 | 19 | 0 | 0 | 2 |
[9] † Analox bipunctata Taxon name last Modified on 07/21/23 | 12 | 89 | 87 | 0 | 30 | 0 | 0 | 2 |
[10] † Bathydiscus dolichometopus Taxon name last Modified on 07/21/23 | 9 | 92 | 90 | 0 | 30 | 0 | 0 | 2 |
[11] † Bolboparia superba Taxon name last Modified on 07/21/23 | 13 | 97 | 96 | 0 | 20 | 0 | 0 | 2 |
[12] † Calodiscus lobatus Taxon name last Modified on 07/21/23 | 9 | 104 | 98 | 0 | 22 | 0 | 0 | 2 |
[13] † Moroxxonus notabilis Taxon name last Modified on 07/21/23 | 9 | 90 | 88 | 0 | 32 | 0 | 0 | 2 |
[14] † Chelediscus acifer Taxon name last Modified on 07/21/23 | 0 | 103 | 101 | 0 | 28 | 0 | 0 | 2 |
[15] † Chelediscus chathamensis Taxon name last Modified on 07/21/23 | 14 | 90 | 88 | 0 | 27 | 0 | 0 | 2 |
[16] † Cobboldites comleyensis Taxon name last Modified on 07/21/23 | 9 | 89 | 88 | 0 | 32 | 0 | 0 | 2 |
[17] † Cobboldites itsariensis Taxon name last Modified on 07/21/23 | 10 | 90 | 86 | 0 | 33 | 0 | 0 | 2 |
[18] † Dawsonia bohemicus Taxon name last Modified on 07/21/23 | 6 | 96 | 96 | 0 | 27 | 0 | 0 | 2 |
[19] † Dawsonia dawsoni Taxon name last Modified on 07/21/23 | 2 | 100 | 99 | 0 | 28 | 0 | 0 | 2 |
[20] † Delgadella amouslekensis Taxon name last Modified on 07/21/23 | 16 | 89 | 88 | 0 | 25 | 0 | 0 | 2 |
[21] † Delgadella caudatus Taxon name last Modified on 07/21/23 | 9 | 96 | 95 | 0 | 25 | 0 | 0 | 2 |
[22] † Delgadella lenaicus Taxon name last Modified on 07/21/23 | 3 | 101 | 100 | 0 | 26 | 0 | 0 | 2 |
[23] † Dicerodiscus tsunyiensis Taxon name last Modified on 07/21/23 | 19 | 89 | 88 | 0 | 22 | 0 | 0 | 2 |
[24] † Egyngolia obtusa Taxon name last Modified on 07/21/23 | 4 | 109 | 106 | 0 | 19 | 0 | 0 | 2 |
[25] † Egyngolia willochra Taxon name last Modified on 07/21/23 | 9 | 107 | 104 | 0 | 16 | 0 | 0 | 2 |
[26] † Egyngolia zaicevi Taxon name last Modified on 07/21/23 | 46 | 61 | 61 | 0 | 22 | 0 | 0 | 2 |
[27] † Ekwipagetia marginata Taxon name last Modified on 07/21/23 | 9 | 108 | 104 | 0 | 16 | 0 | 0 | 2 |
[28] † Ekwipagetia plicofimbria Taxon name last Modified on 07/21/23 | 8 | 108 | 104 | 0 | 17 | 0 | 0 | 2 |
[29] † Eodiscus borealis Taxon name last Modified on 07/21/23 | 3 | 102 | 101 | 0 | 25 | 0 | 0 | 2 |
[30] † Eodiscus scanicus Taxon name last Modified on 07/21/23 | 2 | 106 | 103 | 0 | 24 | 0 | 0 | 2 |
[31] † Hebediscina blagonravovi Taxon name last Modified on 07/21/23 | 17 | 97 | 94 | 0 | 18 | 0 | 0 | 2 |
[32] † Hebediscina sardoa Taxon name last Modified on 07/21/23 | 8 | 107 | 103 | 0 | 18 | 0 | 0 | 2 |
[33] † Hebediscina yuqingensis Taxon name last Modified on 07/21/23 | 12 | 106 | 103 | 0 | 14 | 0 | 0 | 2 |
[34] † Hebediscus attleborensis Taxon name last Modified on 07/21/23 | 16 | 89 | 88 | 0 | 25 | 0 | 0 | 2 |
[35] † Helepagetia bitruncula Taxon name last Modified on 07/21/23 | 58 | 68 | 66 | 0 | 5 | 0 | 0 | 2 |
[36] † Jinghediscus nummularius Taxon name last Modified on 07/21/23 | 60 | 59 | 58 | 0 | 11 | 0 | 0 | 2 |
[37] † Kiskinella cristata Taxon name last Modified on 07/21/23 | 11 | 102 | 102 | 0 | 16 | 0 | 0 | 2 |
[38] † Korobovia ocellata Taxon name last Modified on 07/21/23 | 8 | 100 | 98 | 0 | 23 | 0 | 0 | 2 |
[39] † Lenadiscus unicus Taxon name last Modified on 07/21/23 | 16 | 98 | 95 | 0 | 18 | 0 | 0 | 2 |
[40] † Leptochilodiscus punculatus Taxon name last Modified on 07/21/23 | 8 | 92 | 89 | 0 | 32 | 0 | 0 | 2 |
[41] † Leptochilodiscus succinctus Taxon name last Modified on 07/21/23 | 1 | 103 | 99 | 0 | 29 | 0 | 0 | 2 |
[42] † Litometopus longispinus Taxon name last Modified on 07/21/23 | 9 | 90 | 90 | 0 | 30 | 0 | 0 | 2 |
[43] † Luvsanodiscus gammatus Taxon name last Modified on 07/21/23 | 0 | 106 | 105 | 0 | 24 | 0 | 0 | 2 |
[44] † Macannaia maladensis Taxon name last Modified on 07/21/23 | 1 | 118 | 114 | 0 | 14 | 0 | 0 | 2 |
[45] † Mallagnostus desideratus Taxon name last Modified on 07/21/23 | 47 | 56 | 56 | 0 | 26 | 0 | 0 | 2 |
[46] † Mallagnostus limbatus Taxon name last Modified on 07/21/23 | 9 | 90 | 87 | 0 | 33 | 0 | 0 | 2 |
[47] † Mallagnostus llarenai Taxon name last Modified on 07/21/23 | 6 | 99 | 95 | 0 | 28 | 0 | 0 | 2 |
[48] † Meniscuchus menetus Taxon name last Modified on 07/21/23 | 8 | 94 | 92 | 0 | 29 | 0 | 0 | 2 |
[49] † Meniscuchus nanus Taxon name last Modified on 07/21/23 | 12 | 88 | 88 | 0 | 29 | 0 | 0 | 2 |
[50] † Limbadiscus dilata Taxon name last Modified on 07/21/23 | 20 | 92 | 90 | 0 | 19 | 0 | 0 | 2 |
[51] † Limbadiscus incita Taxon name last Modified on 07/21/23 | 16 | 98 | 94 | 0 | 19 | 0 | 0 | 2 |
[52] † Neopagetina rjonsnitzkii Taxon name last Modified on 07/21/23 | 9 | 107 | 105 | 0 | 15 | 0 | 0 | 2 |
[53] † Ninadiscus strobulatus Taxon name last Modified on 07/21/23 | 13 | 97 | 92 | 0 | 24 | 0 | 0 | 2 |
[54] † Oodiscus subgranulatus Taxon name last Modified on 07/21/23 | 9 | 92 | 91 | 0 | 29 | 0 | 0 | 2 |
[55] † Opsidiscus bilobatus Taxon name last Modified on 07/21/23 | 12 | 103 | 100 | 0 | 17 | 0 | 0 | 2 |
[56] † Opsidiscus longispinus Taxon name last Modified on 07/21/23 | 40 | 75 | 74 | 0 | 15 | 0 | 0 | 2 |
[57] † Opsidiscus microspinus Taxon name last Modified on 07/21/23 | 1 | 116 | 112 | 0 | 16 | 0 | 0 | 2 |
[58] † Pagetia bootes Taxon name last Modified on 07/21/23 | 1 | 114 | 113 | 0 | 15 | 0 | 0 | 2 |
[59] † Pagetia prolata Taxon name last Modified on 07/21/23 | 1 | 116 | 114 | 0 | 14 | 0 | 0 | 2 |
[60] † Pagetia aspinosa Taxon name last Modified on 07/21/23 | 1 | 114 | 113 | 0 | 15 | 0 | 0 | 2 |
[61] † Pagetia resseri Taxon name last Modified on 07/21/23 | 1 | 114 | 113 | 0 | 15 | 0 | 0 | 2 |
[62] † Pagetides elegans Taxon name last Modified on 07/21/23 | 1 | 116 | 112 | 0 | 16 | 0 | 0 | 2 |
[63] † Pagetides fragum Taxon name last Modified on 07/21/23 | 8 | 107 | 104 | 0 | 17 | 0 | 0 | 2 |
[64] † Pseudocobboldia pulchra Taxon name last Modified on 07/21/23 | 10 | 100 | 97 | 0 | 22 | 0 | 0 | 2 |
[65] † Runcinodiscus index Taxon name last Modified on 07/21/23 | 8 | 96 | 95 | 0 | 26 | 0 | 0 | 2 |
[66] † Semadiscus sollennis Taxon name last Modified on 07/21/23 | 45 | 58 | 58 | 0 | 26 | 0 | 0 | 2 |
[67] † Serrodiscus ctenoa Taxon name last Modified on 07/21/23 | 0 | 105 | 102 | 0 | 27 | 0 | 0 | 2 |
[68] † Serrodiscus daedalus Taxon name last Modified on 07/21/23 | 11 | 98 | 94 | 0 | 24 | 0 | 0 | 2 |
[69] † Serrodiscus gravestocki Taxon name last Modified on 07/21/23 | 11 | 97 | 95 | 0 | 23 | 0 | 0 | 2 |
[70] † Serrodiscus speciosus Taxon name last Modified on 07/21/23 | 1 | 104 | 102 | 0 | 26 | 0 | 0 | 2 |
[71] † Sinodiscus shipaiensis Taxon name last Modified on 07/21/23 | 0 | 106 | 105 | 0 | 24 | 0 | 0 | 2 |
[72] † Sinodiscus subquadratus Taxon name last Modified on 07/21/23 | 8 | 101 | 98 | 0 | 23 | 0 | 0 | 2 |
[73] † Sinopagetia jinnanensis Taxon name last Modified on 07/21/23 | 10 | 101 | 101 | 0 | 18 | 0 | 0 | 2 |
[74] † Stigmadiscus stenometopus Taxon name last Modified on 07/21/23 | 16 | 89 | 87 | 0 | 26 | 0 | 0 | 2 |
[75] † Tannudiscus altus Taxon name last Modified on 07/21/23 | 10 | 91 | 87 | 0 | 32 | 0 | 0 | 2 |
[76] † Tannudiscus balanus Taxon name last Modified on 07/21/23 | 0 | 101 | 98 | 0 | 31 | 0 | 0 | 2 |
[77] † Tchernyshevioides ninae Taxon name last Modified on 07/21/23 | 8 | 101 | 100 | 0 | 21 | 0 | 0 | 2 |
[78] † Weymouthia nobilis Taxon name last Modified on 07/21/23 | 27 | 76 | 76 | 0 | 26 | 0 | 0 | 2 |
[79] † Yukonia intermedia Taxon name last Modified on 07/21/23 | 1 | 115 | 109 | 0 | 19 | 0 | 0 | 2 |
[80] † Yukonides lacrinus Taxon name last Modified on 07/21/23 | 9 | 106 | 102 | 0 | 18 | 0 | 0 | 2 |
[81] † Acadagnostus syrma Taxon name last Modified on 07/21/23 | 0 | 108 | 108 | 0 | 21 | 0 | 0 | 2 |
[82] † Itagnostus oepiki Taxon name last Modified on 07/21/23 | 1 | 104 | 104 | 0 | 24 | 0 | 0 | 2 |
[83] † Archaeagnostus primigeneus mI Taxon name last Modified on 07/21/23 | 8 | 92 | 92 | 0 | 29 | 0 | 0 | 2 |
[84] † Redeagnostus ferox IIa Taxon name last Modified on 07/21/23 | 1 | 103 | 103 | 0 | 25 | 0 | 0 | 2 |
[85] † Pseudoperonopsis bifidus IIb Taxon name last Modified on 07/21/23 | 7 | 97 | 97 | 0 | 25 | 0 | 0 | 2 |
[86] † Pentagnostus brighamensis mIII Taxon name last Modified on 07/21/23 | 0 | 101 | 101 | 0 | 28 | 0 | 0 | 2 |
[87] † Peronopsis montis Va Taxon name last Modified on 07/21/23 | 1 | 101 | 101 | 0 | 27 | 0 | 0 | 2 |
[88] † Peronopsis amplaxis Va Taxon name last Modified on 07/21/23 | 0 | 101 | 101 | 0 | 28 | 0 | 0 | 2 |
[89] † Itagnostus interstricta Vb Taxon name last Modified on 07/21/23 | 1 | 104 | 104 | 0 | 24 | 0 | 0 | 2 |
[90] † Quadragnostus depressa VI Taxon name last Modified on 07/21/23 | 7 | 99 | 99 | 0 | 23 | 0 | 0 | 2 |
[91] † Diplorrhina cuneifera VII Taxon name last Modified on 07/21/23 | 7 | 98 | 98 | 0 | 24 | 0 | 0 | 2 |
[92] † Gratagnostus latus VIII Taxon name last Modified on 07/21/23 | 7 | 99 | 99 | 0 | 23 | 0 | 0 | 2 |
[93] † P svenax egenus IX Taxon name last Modified on 07/21/23 | 7 | 97 | 97 | 0 | 25 | 0 | 0 | 2 |
[94] † Baltagnostus rakuroensis Xa Taxon name last Modified on 07/21/23 | 89 | 39 | 39 | 0 | 1 | 0 | 0 | 2 |
[95] † P vulgagnostus longinqua Xa Taxon name last Modified on 07/21/23 | 8 | 98 | 98 | 0 | 23 | 0 | 0 | 2 |
[96] † Ammagnostus jegorovae Xb Taxon name last Modified on 07/21/23 | 7 | 95 | 95 | 0 | 27 | 0 | 0 | 2 |
[97] † Pentagnostus bonnerensis mXII Taxon name last Modified on 07/21/23 | 9 | 89 | 89 | 0 | 31 | 0 | 0 | 2 |
[98] † P svenax pusillus XIII Taxon name last Modified on 07/21/23 | 7 | 98 | 98 | 0 | 24 | 0 | 0 | 2 |
[99] † Itagnostus gaspensis XIVa Taxon name last Modified on 07/21/23 | 6 | 99 | 99 | 0 | 24 | 0 | 0 | 2 |
[100] † Acadagnostus acadica XIVb Taxon name last Modified on 07/21/23 | 7 | 98 | 98 | 0 | 24 | 0 | 0 | 2 |
[101] † P proacadagnostus normata XIVb Taxon name last Modified on 07/21/23 | 7 | 100 | 100 | 0 | 22 | 0 | 0 | 2 |
[102] † Peronopsis segmenta mXVI Taxon name last Modified on 07/21/23 | 90 | 39 | 39 | 0 | 0 | 0 | 0 | 2 |
[103] † Peronopsis integer Taxon name last Modified on 07/21/23 | 4 | 98 | 98 | 0 | 27 | 0 | 0 | 2 |
[104] † Peronopsis roddyi Taxon name last Modified on 07/21/23 | 1 | 100 | 100 | 0 | 28 | 0 | 0 | 2 |
[105] † Triplagnostus gibbus Taxon name last Modified on 07/21/23 | 0 | 105 | 105 | 0 | 24 | 0 | 0 | 2 |
[106] † Agnostus agnostus pisiformis Taxon name last Modified on 07/21/23 | 2 | 103 | 103 | 0 | 24 | 0 | 0 | 2 |
[107] † Doryagnostus incertus Taxon name last Modified on 07/21/23 | 7 | 99 | 99 | 0 | 23 | 0 | 0 | 2 |
[108] † Diplagnostus planicauda Taxon name last Modified on 07/21/23 | 7 | 101 | 101 | 0 | 21 | 0 | 0 | 2 |
[109] † Clavagnostus repandus Taxon name last Modified on 07/21/23 | 7 | 95 | 95 | 0 | 27 | 0 | 0 | 2 |
[110] † Glyptagnostus reticulatus Taxon name last Modified on 07/21/23 | 7 | 98 | 98 | 0 | 24 | 0 | 0 | 2 |
[111] † Ptychagnostus praecurrens Taxon name last Modified on 07/21/23 | 0 | 103 | 103 | 0 | 26 | 0 | 0 | 2 |
[112] † Condylopyge amitina Taxon name last Modified on 07/21/23 | 0 | 102 | 102 | 0 | 27 | 0 | 0 | 2 |
[113] † Pleuroctenium granulatum Taxon name last Modified on 07/21/23 | 0 | 100 | 100 | 0 | 29 | 0 | 0 | 2 |
[114] † W interstricta FCMP 1106+1107+1108 Taxon name last Modified on 07/21/23 | 27 | 109 | 102 | 0 | 0 | 0 | 0 | 2 |
[115] † P interstricta FCMP 1105 Taxon name last Modified on 07/21/23 | 89 | 38 | 38 | 0 | 2 | 0 | 0 | 2 |
[116] † P interstricta FCMP 1110+1111 Taxon name last Modified on 07/21/23 | 87 | 45 | 42 | 0 | 0 | 0 | 0 | 2 |
[117] † W interstricta FCMP 1109 Taxon name last Modified on 07/21/23 | 3 | 97 | 97 | 0 | 29 | 0 | 0 | 2 |
[118] † P montis FCMP 1100+1101 Taxon name last Modified on 07/21/23 | 96 | 35 | 33 | 0 | 0 | 0 | 0 | 2 |
[119] † C montis FCMP 1102 Taxon name last Modified on 07/21/23 | 44 | 61 | 61 | 0 | 24 | 0 | 0 | 2 |
[120] † P montis FCMP 1103 Taxon name last Modified on 07/21/23 | 91 | 37 | 37 | 0 | 1 | 0 | 0 | 2 |
[121] † P montis FCMP 1104 Taxon name last Modified on 07/21/23 | 90 | 37 | 37 | 0 | 2 | 0 | 0 | 2 |
[122] † W brighamensis FCMP1126+1125+1127 Taxon name last Modified on 07/21/23 | 36 | 97 | 93 | 0 | 0 | 0 | 0 | 2 |
[123] † P praecurrens FCMP all Taxon name last Modified on 07/21/23 | 24 | 114 | 105 | 0 | 0 | 0 | 0 | 2 |
[124] † W bonnerensis FCMP all Taxon name last Modified on 07/21/23 | 21 | 142 | 108 | 0 | 0 | 0 | 0 | 2 |
Project downloads
type | number of downloads | Individual items downloaded (where applicable) |
Total downloads from project | 2 | |
Media downloads | 2 | M890391 (2 downloads); |