Project 728: R. H. Pine, R. M. Timm, M. Weksler. 2012. A newly recognized clade of trans-Andean Oryzomyini (Rodentia: Cricetidae), with description of a new genus. Journal of Mammalogy. 93 (3):851-870.
Abstract
We expand upon recent studies on relationships within the Oryzomyini, in particular, those involving taxa currently assigned to the genus Sigmodontomys. In recent years, Sigmodontomys has been treated as including 2 species, alfari (J. A. Allen, 1897) and aphrastus (Harris, 1932), but throughout their complicated taxonomic history both species also have been placed in the genus Oryzomys, and alfari independently in Nectomys. Using morphological (98 external, cranial, dental, and postcranial) and molecular (nuclear interphotoreceptor retinoid-binding protein gene and mitochondrial cytochrome-b and ribosomal 12S RNA genes) characters, we infer the phylogenetic position of these 2 species within Oryzomyini. We document that alfari and aphrastus do not form a monophyletic group. Sigmodontomys alfari is most closely related to Melanomys, and aphrastus is either the sister to that clade, or to the extinct Caribbean genus Megalomys. Thus, aphrastus is best regarded as representing a new genus, which is described and named herein. This new genus falls within the Sigmodontomys-Melanomys-Aegialomys-Nesoryzomys clade, which forms a monophyletic group of mainly southern Central American and northern South American taxa primarily restricted to lowland to midelevation montane trans-Andean habitats and possessing a marked ability to cross expanses of salt water. The new genus occurs at middle elevations from north-central Costa Rica to northwestern Ecuador and along with some populations of Aegialomys and Melanomys occupies the highest elevations for members of this group.Read the article »
Article DOI: 10.1644/11-MAMM-A-012.1
Project DOI: 10.7934/P728, http://dx.doi.org/10.7934/P728
This project contains | Matrices |
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Download Project SDD File | Total scored cells: 5217 Total media associated with cells: 0 Total labels associated with cell media: 0 |
Characters | |
Total characters: 98 Total characters with associated media: 0 Total characters with media with labels: 0 Total character states: 238 Total character states with associated media: 0 Total character states with media with labels:0 Total unordered/ordered characters:98/0 |
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MorphoBank Project 728
MorphoBank Project 728
- Creation Date:
02 May 2012 - Publication Date:
09 October 2012 - Media downloads: 16
- Matrix downloads: 24
Authors' Institutions
- Universidade Federal do Rio De Janeiro (UFRJ)
- University of Kansas
- Museu Nacional do Rio de Janeiro
- Field Museum of Natural History
Members
member name | taxa | specimens | media | chars | character
| cell scorings (scored, NPA, "-") | cell
| rules | ||||||
Marcelo Weksler Project Administrator | 59 | 3 | 9 | 98 | 0 | 0 | 5217 (5217, 0, 0) | 0 | 0 | 0 |
Taxonomic Overview for Matrix 'M1646' (59 Taxa)
taxon | unscored cells |
scored cells |
no cell support |
NPA cells |
"-" cells | cell images | labels on cell images |
member access |
[1] Nyctomys sumichrasti Taxon name last Modified on 12/05/13 | 3 | 95 | 95 | 0 | 0 | 0 | 0 | 1 |
[2] Peromyscus maniculatus Taxon name last Modified on 12/05/13 | 10 | 88 | 88 | 0 | 0 | 0 | 0 | 1 |
[3] Delomys sublineatus Taxon name last Modified on 12/05/13 | 13 | 85 | 85 | 0 | 0 | 0 | 0 | 1 |
[4] Thomasomys baeops Taxon name last Modified on 12/05/13 | 3 | 97 | 95 | 0 | 0 | 0 | 0 | 1 |
[5] Wiedomys pyrrhorhinos Taxon name last Modified on 12/05/13 | 12 | 87 | 86 | 0 | 0 | 0 | 0 | 1 |
[6] Aegialomys xanthaeolus Taxon name last Modified on 12/05/13 | 9 | 94 | 89 | 0 | 0 | 0 | 0 | 1 |
[7] Amphinectomys savamis Taxon name last Modified on 12/05/13 | 67 | 31 | 31 | 0 | 0 | 0 | 0 | 1 |
[8] Cerradomys subflavus Taxon name last Modified on 12/05/13 | 8 | 95 | 90 | 0 | 0 | 0 | 0 | 1 |
[9] Eremoryzomys polius Taxon name last Modified on 12/05/13 | 22 | 76 | 76 | 0 | 0 | 0 | 0 | 1 |
[10] Euryoryzomys lamia Taxon name last Modified on 12/05/13 | 22 | 77 | 76 | 0 | 0 | 0 | 0 | 1 |
[11] Euryoryzomys macconnelli Taxon name last Modified on 12/05/13 | 8 | 92 | 90 | 0 | 0 | 0 | 0 | 1 |
[12] Euryoryzomys russatus Taxon name last Modified on 12/05/13 | 14 | 85 | 84 | 0 | 0 | 0 | 0 | 1 |
[13] Handleyomys alfaroi Taxon name last Modified on 12/05/13 | 7 | 94 | 91 | 0 | 0 | 0 | 0 | 1 |
[14] Handleyomys chapmani Taxon name last Modified on 12/05/13 | 10 | 90 | 88 | 0 | 0 | 0 | 0 | 1 |
[15] Handleyomys intectus Taxon name last Modified on 12/05/13 | 16 | 84 | 82 | 0 | 0 | 0 | 0 | 1 |
[16] Handleyomys rostratus Taxon name last Modified on 12/05/13 | 1 | 99 | 97 | 0 | 0 | 0 | 0 | 1 |
[17] Holochilus brasiliensis Taxon name last Modified on 12/05/13 | 1 | 98 | 97 | 0 | 0 | 0 | 0 | 1 |
[18] Hylaeamys megacephalus Taxon name last Modified on 12/05/13 | 0 | 100 | 98 | 0 | 0 | 0 | 0 | 1 |
[19] Hylaeamys yunganus Taxon name last Modified on 12/05/13 | 11 | 88 | 87 | 0 | 0 | 0 | 0 | 1 |
[20] Lundomys molitor Taxon name last Modified on 12/05/13 | 9 | 90 | 89 | 0 | 0 | 0 | 0 | 1 |
[21] Melanomys columbianus Taxon name last Modified on 12/05/13 | 1 | 103 | 97 | 0 | 0 | 0 | 0 | 1 |
[22] Microryzomys minutus Taxon name last Modified on 12/05/13 | 3 | 95 | 95 | 0 | 0 | 0 | 0 | 1 |
[23] Mindomys hammondi Taxon name last Modified on 12/05/13 | 22 | 77 | 76 | 0 | 0 | 0 | 0 | 1 |
[24] Neacomys minutus Taxon name last Modified on 12/05/13 | 22 | 76 | 76 | 0 | 0 | 0 | 0 | 1 |
[25] Neacomys musseri Taxon name last Modified on 12/05/13 | 16 | 82 | 82 | 0 | 0 | 0 | 0 | 1 |
[26] Neacomys spinosus Taxon name last Modified on 12/05/13 | 1 | 98 | 97 | 0 | 0 | 0 | 0 | 1 |
[27] Nectomys apicalis Taxon name last Modified on 12/05/13 | 15 | 83 | 83 | 0 | 0 | 0 | 0 | 1 |
[28] Nectomys squamipes Taxon name last Modified on 12/05/13 | 5 | 94 | 93 | 0 | 0 | 0 | 0 | 1 |
[29] Nephelomys albigularis Taxon name last Modified on 12/05/13 | 9 | 92 | 89 | 0 | 0 | 0 | 0 | 1 |
[30] Nephelomys levipes Taxon name last Modified on 12/05/13 | 10 | 90 | 88 | 0 | 0 | 0 | 0 | 1 |
[31] Nesoryzomys narboroughi Taxon name last Modified on 12/05/13 | 5 | 93 | 93 | 0 | 0 | 0 | 0 | 1 |
[32] Nesoryzomys swarthi Taxon name last Modified on 12/05/13 | 37 | 61 | 61 | 0 | 0 | 0 | 0 | 1 |
[33] Oecomys bicolor Taxon name last Modified on 12/05/13 | 8 | 93 | 90 | 0 | 0 | 0 | 0 | 1 |
[34] Oecomys catherinae Taxon name last Modified on 12/05/13 | 23 | 75 | 75 | 0 | 0 | 0 | 0 | 1 |
[35] Oecomys concolor Taxon name last Modified on 12/05/13 | 1 | 99 | 97 | 0 | 0 | 0 | 0 | 1 |
[36] Oecomys mamorae Taxon name last Modified on 12/05/13 | 10 | 89 | 88 | 0 | 0 | 0 | 0 | 1 |
[37] Oecomys trinitatis Taxon name last Modified on 12/05/13 | 12 | 89 | 86 | 0 | 0 | 0 | 0 | 1 |
[38] Oligoryzomys flavescens Taxon name last Modified on 12/05/13 | 11 | 87 | 87 | 0 | 0 | 0 | 0 | 1 |
[39] Oligoryzomys fornesi Taxon name last Modified on 12/05/13 | 21 | 77 | 77 | 0 | 0 | 0 | 0 | 1 |
[40] Oligoryzomys fulvescens Taxon name last Modified on 12/05/13 | 1 | 97 | 97 | 0 | 0 | 0 | 0 | 1 |
[41] Oligoryzomys nigripes Taxon name last Modified on 12/05/13 | 8 | 91 | 90 | 0 | 0 | 0 | 0 | 1 |
[42] Oligoryzomys stramineus Taxon name last Modified on 12/05/13 | 23 | 75 | 75 | 0 | 0 | 0 | 0 | 1 |
[43] Oreoryzomys balneator Taxon name last Modified on 12/05/13 | 16 | 82 | 82 | 0 | 0 | 0 | 0 | 1 |
[44] Oryzomys couesi Taxon name last Modified on 12/05/13 | 10 | 88 | 88 | 0 | 0 | 0 | 0 | 1 |
[45] Oryzomys palustris Taxon name last Modified on 12/05/13 | 0 | 100 | 98 | 0 | 0 | 0 | 0 | 1 |
[46] Pseudoryzomys simplex Taxon name last Modified on 12/05/13 | 9 | 90 | 89 | 0 | 0 | 0 | 0 | 1 |
[47] Scolomys ucayalensis Taxon name last Modified on 12/05/13 | 9 | 89 | 89 | 0 | 0 | 0 | 0 | 1 |
[48] Sigmodontomys alfari Taxon name last Modified on 12/05/13 | 2 | 100 | 96 | 0 | 0 | 0 | 0 | 1 |
[49] Tanyuromys aphrastus Taxon name last Modified on 12/05/13 | 17 | 84 | 81 | 0 | 0 | 0 | 0 | 1 |
[50] Sooretamys angouya Taxon name last Modified on 12/05/13 | 2 | 99 | 96 | 0 | 0 | 0 | 0 | 1 |
[51] Transandinomys talamancae Taxon name last Modified on 12/05/13 | 1 | 100 | 97 | 0 | 0 | 0 | 0 | 1 |
[52] Zygodontomys brevicauda Taxon name last Modified on 12/05/13 | 1 | 102 | 97 | 0 | 0 | 0 | 0 | 1 |
[53] Zygodontomys cherriei Taxon name last Modified on 12/05/13 | 1 | 100 | 97 | 0 | 0 | 0 | 0 | 1 |
[54] Drymoreomys albimaculatus Taxon name last Modified on 12/05/13 | 2 | 100 | 96 | 0 | 0 | 0 | 0 | 1 |
[55] Megalomys desmarestii Taxon name last Modified on 12/05/13 | 18 | 80 | 80 | 0 | 0 | 0 | 0 | 1 |
[56] Megalomys luciae Taxon name last Modified on 12/05/13 | 28 | 70 | 70 | 0 | 0 | 0 | 0 | 1 |
[57] Rhipidomys nitela Taxon name last Modified on 12/05/13 | 15 | 83 | 83 | 0 | 0 | 0 | 0 | 1 |
[58] Melanomys chrysomelas Taxon name last Modified on 12/05/13 | 21 | 86 | 77 | 0 | 0 | 0 | 0 | 1 |
[59] Melanomys caliginosus Taxon name last Modified on 12/05/13 | 2 | 103 | 96 | 0 | 0 | 0 | 0 | 1 |
Project downloads
type | number of downloads | Individual items downloaded (where applicable) |
Total downloads from project | 419 | |
Media downloads | 16 | M107731 (1 download); M (1 download); M107734 (5 downloads); M107737 (6 downloads); M107735 (1 download); M107738 (1 download); M107739 (1 download); |
Matrix downloads | 24 | Tanyuromys morphological matrix (24 downloads); |
Document downloads | 5 | complete matrix, including morphological and molecular characters, used in Tanyuromys analyses. (5 downloads); |
Project downloads | 374 |