Please find here additional documents associated with this project. Occasionally MorphoBank receives matrices that are not formatted to parse to the database, these can also be found here, along with others and are presented 'as is' from the scientist.
10 Documents
Character labels and state descriptions (Downloaded 1 time )
From Appendix 2 of paper
Matrix and character statistics - Microsoft Excel format
Matrix and character statistics of the Parsimony analysis under equal weight using TNT.
TNT batch file for equal weighting analysis
Commands used in TNT to run phylogenetic analysis of combined data set (morphology + molecules) under equal weights.
TNT batch file for extended implied weighting analysis
Commands used in TNT to run phylogenetic analysis of combined data set (morphology + molecules) under implied weights with varying numbers o k.
TNT matrix, morphological and molecular data (Downloaded 1 time )
TNT tree with symetric resampling branch support
Extended implied weight with constant k=6.
Value over branches are GC/GF (GC = relative frequency, GF = absolute frequency).
No support or contradictory support for groups take on zero (absolute frequency) or negative (GC frequency, showed in square brackets) values.
SVG format (opens in web browser).
TNT tree with symetric resampling branch support
Extended implied weight with constant k=10
Value over branches are GC/GF (GC = relative frequency, GF = absolute frequency).
No support or contradictory support for groups take on zero (absolute frequency) or negative (GC frequency, showed in square brackets) values.
SVG format (opens in web browser).
TNT tree with symetric resampling branch support
Extended implied weight with constant k=20.
Value over branches are GC/GF (GC = relative frequency, GF = absolute frequency).
No support or contradictory support for groups take on zero (absolute frequency) or negative (GC frequency, showed in square brackets) values.
SVG format (opens in web browser).
TNT tree with symetric resampling branch support
Extended implied weight with constant k=30.
Value over branches are GC/GF (GC = relative frequency, GF = absolute frequency).
No support or contradictory support for groups take on zero (absolute frequency) or negative (GC frequency, showed in square brackets) values.
SVG format (opens in web browser).
TNT tree with symetric resampling branch support
Extended implied weight with constant k=40-90 (all trees under these values of k had the same topology and the same statistics).
Extended implied weight with constant k=6.
Value over branches are GC/GF (GC = relative frequency, GF = absolute frequency).
No support or contradictory support for groups take on zero (absolute frequency) or negative (GC frequency, showed in square brackets) values.
SVG format (opens in web browser).